Publications

Theses

[BardelThesis05]: Claire Bardel. Mise en évidence de facteurs génétiques de risque en utilisant des phylogénies d'haplotypes. Master thesis, Université Paris VI, Dec. 2005.
[BardelDEA02]: Claire Bardel. Utilisation de phylogénies d'haplotypes pour la mise en évidence de facteurs génétiques de risque dans les maladies complexe. Master thesis, Université Paris VI, Jul. 2002.This master thesis received the Jacques Lebbe award from the french society of systematics in 2003.

Journal Papers

[CroiseauBMCGen07]: Pascal Croiseau, Claire Bardel and Emmanuelle Génin. Efficiency of multiple imputation to test for association in the presence of missing data. BMC Genetics, 2007.
[BardelBMCGen07]: Claire Bardel, Pascal Croiseau and Emmanuelle Génin. Dealing with missing phase and missing data in phylogeny-based analysis. BMC Genetics, 2007.
[BardelBioinformatics06]: Claire Bardel, Vincent Danjean and Emmanuelle Génin. ALTree: Association detection and Localization of susceptibility sites using haplotype Phylogenetic Trees. Bioinformatics, June 2006.
[BardelEJHG05]: Claire Bardel, Pierre Darlu and Emmanuelle Génin. Clustering of haplotypes based on phylogeny: how good a strategy for association testing?. European Journal of Human Genetics, Nov. 2005.
[BardelBMCGen05]: Claire Bardel, Vincent Danjean, Jean-Pierre Hugot, Pierre Darlu and Emmanuelle Génin. On the use of haplotype phylogeny to detect disease susceptibility loci. BMC Genetics, May 2005.

Oral communications in conferences

[BardelIGES06]: Claire Bardel, Vincent Danjean, Pierre Darlu and Emmanuelle Génin. On the use of phylogeny-based tests to detect association between quantitative traits and haplotypes. 15th annual meeting of the International Genetic Epidemiology Society, St Pete beach, USA, Nov. 2006.
[BardelJSFB06]: Claire Bardel. Mise en évidence de facteurs génétiques de risque en utilisant des phylogénies d'haplotypes. Journée de la société française de biométrie, Sep. 2006.
[BardelPPD06]: Claire Bardel, Pierre Darlu and Emmanuelle Génin. Utilisation de phylogénies d'haplotypes pour identifier des locus à risque. Le petit pois déridé, Lille, France, Aug. 2006.
[BardelIGES05]: Claire Bardel, Pierre Darlu and Emmanuelle Génin. Identification of disease susceptibility loci using a co-evolution measure and haplotype phylogenies. 14th annual meeting of the International Genetic Epidemiology Society, Park City, USA, Oct. 2005.Winner of the Williams Award of the International Genetic Epidemiology Society
[CroiseauEMGM05]: Pascal Croiseau, Françoise Clerget-Darpoux, Marie-Claude Babron, Claire Bardel and Emmanuelle Génin. Caution in the interpretation of association in presence of missing data. 33rd European Mathematical Genetics Meeting, Le Kremlin-Bicêtre, (France), April 2005.
[BardelEMGM04]: Claire Bardel, Vincent Danjean, Emmanuelle Génin and Pierre Darlu. Efficiency of the cladistic approach to localise interacting susceptibility loci. 32nd European Mathematical Genetics Meeting, Kiel (Germany), March 2004.
[BardelEMGM03]: Claire Bardel, Vincent Danjean, Emmanuelle Génin and Pierre Darlu. On the use of haplotype phylogenies to detect disease susceptibility loci. 31st European Mathematical Genetics Meeting, Cambridge (United Kingdom), April 2003.

Posters

[BardelGAW06]: Claire Bardel, Pascal Croiseau and Emmanuelle Génin. Dealing with missing phase and missing data in phylogeny-based analysis. 15th Genetic Analysis Workshop, St Pete beach, USA, Nov. 2006.
[BardelAssisesGenet06]: Claire Bardel, Emmanuelle Génin and Pierre Darlu. Identification de sites de susceptibilité à des maladies en utilisant des phylogénies d'haplotypes et un indice de co-évolution. 3ème Assises de Génétiques Humaine et Médicale, Montpellier (France), Jan. 2006.
[BardelASHG05]: Claire Bardel, Caroline Dubertret, Emmanuelle Génin and Pierre Darlu. Detection of a variant in the DRD2 gene involved in schizophrenia using a phylogeny-based method. Annual Meeting of the American Society of Human Genetics, Salt Lake City (USA), Oct. 2005.
[BardelMEPC05]: Claire Bardel, Vincent Danjean, Emmanuelle Génin and Pierre Darlu. An application of phylogeny in genetic epidemiology: the detection of disease susceptibility loci. Mathematics of Evolution and Phylogeny Conference, Paris (France), June 2005.
[BardelAssisesGenet04]: Claire Bardel, Vincent Danjean, Pierre Darlu and Emmanuelle Génin. Utilisation de phylogénies d'haplotypes pour la détection de facteurs génétiques de risque. 2ème Assises de Génétiques Humaine et Médicale, Angers (France), Jan. 2004.
[BardelIGES03]: Claire Bardel, Vincent Danjean, Pierre Darlu and Emmanuelle Génin. Efficiency of the cladistic association analysis. 12th annual meeting of the International Genetic Epidemiology Society, Redondo Beach (USA), Nov. 2003.

Thesis

(top)

Mise en évidence de facteurs génétiques de risque en utilisant des phylogénies d'haplotypes

2005.

Claire Bardel

@PhDThesis{BardelThesis05,

author: = {Claire Bardel},
title: = {Mise en {\'e}vidence de facteurs g{\'e}n{\'e}tiques de risque en utilisant des phylog{\'e}nies d'haplotypes},
school: = {Universit{\'e} Paris VI},
address: = {4 place jussieu, 75005 Paris, France},
note: = {182 pages},
url: = {http://claire.bardel.free.fr/publications.html#BardelThesis05},
month: = dec,
year: = 2005

}

Utilisation de phylogénies d'haplotypes pour la mise en évidence de facteurs génétiques de risque dans les maladies complexe

2002.

Claire Bardel

@MastersThesis{BardelDEA02,

author: = {Claire Bardel},
title: = {Utilisation de phylog{\'e}nies d'haplotypes pour la mise en {\'e}vidence de facteurs g{\'e}n{\'e}tiques de risque dans les maladies complexe},
school: = {Universit{\'e} Paris VI},
month: = jul,
year: = 2002

}

Journal Papers

(top)

Efficiency of multiple imputation to test for association in the presence of missing data

2007.

Pascal Croiseau, Claire Bardel and Emmanuelle Génin

@Article{CroiseauBMCGen07,

author: = {Pascal Croiseau and Claire Bardel and Emmanuelle G{\'e}nin},
title: = {Efficiency of multiple imputation to test for association in the presence of missing data},
journal: = {BMC Genetics},
note: = {GAW15 Proceedings, Accepted for publication},
year: = 2007

}

Dealing with missing phase and missing data in phylogeny-based analysis

2007.

Claire Bardel, Pascal Croiseau and Emmanuelle Génin

@Article{BardelBMCGen07,

author: = {Claire Bardel and Pascal Croiseau and Emmanuelle G{\'e}nin},
title: = {Dealing with missing phase and missing data in phylogeny-based analysis},
journal: = {BMC Genetics},
note: = {GAW15 Proceedings, Accepted for publication},
year: = 2007

}

ALTree: Association detection and Localization of susceptibility sites using haplotype Phylogenetic Trees

2006.

Claire Bardel, Vincent Danjean and Emmanuelle Génin

@Article{BardelBioinformatics06,

author: = {Claire Bardel and Vincent Danjean and Emmanuelle G{\'e}nin},
title: = {{ALT}ree: {A}ssociation detection and {L}ocalization of susceptibility sites using haplotype {P}hylogenetic {T}rees},
journal: = {Bioinformatics},
pages: = {1402--1403},
number: = 11,
volume: = 22,
url: = {http://claire.bardel.free.fr/publications.html#BardelBioinformatics06},
month: = jun,
year: = 2006

}

Clustering of haplotypes based on phylogeny: how good a strategy for association testing?

2005.

Claire Bardel, Pierre Darlu and Emmanuelle Génin

@Article{BardelEJHG05,

author: = {Claire Bardel and Pierre Darlu and Emmanuelle G{\'e}nin},
title: = {Clustering of haplotypes based on phylogeny: how good a strategy for association testing?},
journal: = {European Journal of Human Genetics},
note: = {Accepted for publication},
url: = {http://claire.bardel.free.fr/publications.html#BardelEJHG05},
month: = nov,
year: = 2005

}

On the use of haplotype phylogeny to detect disease susceptibility loci

2005.

Claire Bardel, Vincent Danjean, Jean-Pierre Hugot, Pierre Darlu and Emmanuelle Génin

@Article{BardelBMCGen05,

author: = {Claire Bardel and Vincent Danjean and Jean-Pierre Hugot and Pierre Darlu and Emmanuelle G{\'e}nin},
title: = {On the use of haplotype phylogeny to detect disease susceptibility loci},
journal: = {BMC Genetics},
note: = {Available at \url{http://www.biomedcentral.com/1471-2156/6/24}},
number: = 24,
volume: = 6,
url: = {http://www.biomedcentral.com/1471-2156/6/24},
month: = may,
year: = 2005

}

Oral communications in conferences

(top)

On the use of phylogeny-based tests to detect association between quantitative traits and haplotypes

2006.

Claire Bardel, Vincent Danjean, Pierre Darlu and Emmanuelle Génin

@Misc{BardelIGES06,

author: = {Claire Bardel and Vincent Danjean and Pierre Darlu and Emmanuelle G{\'e}nin},
title: = {{O}n the use of phylogeny-based tests to detect association between quantitative traits and haplotypes},
note: = {15th annual meeting of the International Genetic Epidemiology Society, St Pete beach, USA},
url: = {http://claire.bardel.free.fr/publications.html#BardelIGES06},
month: = nov,
year: = 2006

}

Mise en évidence de facteurs génétiques de risque en utilisant des phylogénies d'haplotypes

2006.

Claire Bardel

@Misc{BardelJSFB06,

author: = {Claire Bardel},
title: = {{M}ise en {\'e}vidence de facteurs g{\'e}n{\'e}tiques de risque en utilisant des phylog{\'e}nies d'haplotypes},
note: = {Journ{\'e}e de la soci{\'e}t{\'e} fran{\c c}aise de biom{\'e}trie},
url: = {http://claire.bardel.free.fr/publications.html#BardelJSFB06},
month: = sep,
year: = 2006

}

Utilisation de phylogénies d'haplotypes pour identifier des locus à risque

2006.

Claire Bardel, Pierre Darlu and Emmanuelle Génin

@Misc{BardelPPD06,

author: = {Claire Bardel and Pierre Darlu and Emmanuelle G{\'e}nin},
title: = {{U}tilisation de phylogénies d'haplotypes pour identifier des locus à risque},
note: = {Le petit pois d{\'e}rid{\'e}, Lille, France},
url: = {http://claire.bardel.free.fr/publications.html#BardelPPD06},
month: = aug,
year: = 2006

}

Identification of disease susceptibility loci using a co-evolution measure and haplotype phylogenies

2005.

Claire Bardel, Pierre Darlu and Emmanuelle Génin

@Misc{BardelIGES05,

author: = {Claire Bardel and Pierre Darlu and Emmanuelle G{\'e}nin},
title: = {Identification of disease susceptibility loci using a co-evolution measure and haplotype phylogenies},
note: = {14th annual meeting of the International Genetic Epidemiology Society, Park City, USA},
url: = {http://claire.bardel.free.fr/publications.html#BardelIGES05},
month: = oct,
year: = 2005

}

Caution in the interpretation of association in presence of missing data

2005.

Pascal Croiseau, Françoise Clerget-Darpoux, Marie-Claude Babron, Claire Bardel and Emmanuelle Génin

@Misc{CroiseauEMGM05,

author: = {Pascal Croiseau and Fran{\c c}oise Clerget-Darpoux and Marie-Claude Babron and Claire Bardel and Emmanuelle G{\'e}nin},
title: = {Caution in the interpretation of association in presence of missing data},
note: = {33rd European Mathematical Genetics Meeting, Le Kremlin-Bic{\^e}tre, (France)},
month: = apr,
year: = 2005

}

Efficiency of the cladistic approach to localise interacting susceptibility loci

2004.

Claire Bardel, Vincent Danjean, Emmanuelle Génin and Pierre Darlu

@Misc{BardelEMGM04,

author: = {Claire Bardel and Vincent Danjean and Emmanuelle G{\'e}nin and Pierre Darlu},
title: = {Efficiency of the cladistic approach to localise interacting susceptibility loci},
note: = {32nd European Mathematical Genetics Meeting, Kiel (Germany)},
month: = mar,
year: = 2004

}

On the use of haplotype phylogenies to detect disease susceptibility loci

2003.

Claire Bardel, Vincent Danjean, Emmanuelle Génin and Pierre Darlu

@Misc{BardelEMGM03,

author: = {Claire Bardel and Vincent Danjean and Emmanuelle G{\'e}nin and Pierre Darlu},
title: = {On the use of haplotype phylogenies to detect disease susceptibility loci},
note: = {31st European Mathematical Genetics Meeting, Cambridge (United Kingdom)},
month: = apr,
year: = 2003

}

Posters

(top)

Dealing with missing phase and missing data in phylogeny-based analysis

2006.

Claire Bardel, Pascal Croiseau and Emmanuelle Génin

@Misc{BardelGAW06,

author: = {Claire Bardel and Pascal Croiseau and Emmanuelle G{\'e}nin},
title: = {{D}ealing with missing phase and missing data in phylogeny-based analysis},
note: = {15th Genetic Analysis Workshop, St Pete beach, USA},
month: = nov,
year: = 2006

}

Identification de sites de susceptibilité à des maladies en utilisant des phylogénies d'haplotypes et un indice de co-évolution

2006.

Claire Bardel, Emmanuelle Génin and Pierre Darlu

@Misc{BardelAssisesGenet06,

author: = {Claire Bardel and Emmanuelle G{\'e}nin and Pierre Darlu},
title: = {Identification de sites de susceptibilit{\'e} {\`a} des maladies en utilisant des phylog{\'e}nies d'haplotypes et un indice de co-{\'e}volution},
note: = {3{\`e}me Assises de Génétiques Humaine et M{\'e}dicale, Montpellier (France)},
month: = jan,
year: = 2006

}

Detection of a variant in the DRD2 gene involved in schizophrenia using a phylogeny-based method

2005.

Claire Bardel, Caroline Dubertret, Emmanuelle Génin and Pierre Darlu

@Misc{BardelASHG05,

author: = {Claire Bardel and Caroline Dubertret and Emmanuelle G{\'e}nin and Pierre Darlu},
title: = {Detection of a variant in the {DRD2} gene involved in schizophrenia using a phylogeny-based method},
note: = {Annual Meeting of the American Society of Human Genetics, Salt Lake City (USA)},
month: = oct,
year: = 2005

}

An application of phylogeny in genetic epidemiology: the detection of disease susceptibility loci

2005.

Claire Bardel, Vincent Danjean, Emmanuelle Génin and Pierre Darlu

@Misc{BardelMEPC05,

author: = {Claire Bardel and Vincent Danjean and Emmanuelle G{\'e}nin and Pierre Darlu},
title: = {An application of phylogeny in genetic epidemiology: the detection of disease susceptibility loci},
note: = {Mathematics of Evolution and Phylogeny Conference, Paris (France)},
month: = jun,
year: = 2005

}

Utilisation de phylogénies d'haplotypes pour la détection de facteurs génétiques de risque

2004.

Claire Bardel, Vincent Danjean, Pierre Darlu and Emmanuelle Génin

@Misc{BardelAssisesGenet04,

author: = {Claire Bardel and Vincent Danjean and Pierre Darlu and Emmanuelle G{\'e}nin},
title: = {Utilisation de phylog{\'e}nies d'haplotypes pour la d{\'e}tection de facteurs g{\'e}n{\'e}tiques de risque},
note: = {2{\`e}me Assises de Génétiques Humaine et M{\'e}dicale, Angers (France)},
month: = jan,
year: = 2004

}

Efficiency of the cladistic association analysis

2003.

Claire Bardel, Vincent Danjean, Pierre Darlu and Emmanuelle Génin

@Misc{BardelIGES03,

author: = {Claire Bardel and Vincent Danjean and Pierre Darlu and Emmanuelle G{\'e}nin},
title: = {Efficiency of the cladistic association analysis},
note: = {12th annual meeting of the International Genetic Epidemiology Society, Redondo Beach (USA)},
howpublished: = {Genetic Epidemiology 25:236-279, abstract n°9},
month: = nov,
year: = 2003

}